CDS

Accession Number TCMCG007C03947
gbkey CDS
Protein Id XP_009122455.1
Location join(19357439..19357633,19357723..19357896,19358122..19358221,19358374..19358844,19359153..19359899,19360242..19360333,19360660..19360733,19360848..19361070,19361228..19361321,19361389..19361543,19361755..19361976,19362296..19362496,19362690..19362815,19362897..19362958,19363159..19363276,19363454..19363726,19363823..19363861)
Gene LOC103847158
GeneID 103847158
Organism Brassica rapa

Protein

Length 1121aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009124207.3
Definition peroxisome biogenesis protein 1 isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category O
Description Peroxisome biogenesis factor 1, N-terminal
KEGG_TC 3.A.20.1
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K13338        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04146        [VIEW IN KEGG]
map04146        [VIEW IN KEGG]
GOs GO:0006082        [VIEW IN EMBL-EBI]
GO:0006605        [VIEW IN EMBL-EBI]
GO:0006625        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006631        [VIEW IN EMBL-EBI]
GO:0006635        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007031        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009062        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015919        [VIEW IN EMBL-EBI]
GO:0016042        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016054        [VIEW IN EMBL-EBI]
GO:0016558        [VIEW IN EMBL-EBI]
GO:0017038        [VIEW IN EMBL-EBI]
GO:0019395        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0030258        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034440        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043574        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044242        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044282        [VIEW IN EMBL-EBI]
GO:0044743        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046395        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0055085        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0065002        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071806        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072329        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]
GO:0072662        [VIEW IN EMBL-EBI]
GO:0072663        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAACGGAAGCGGTGGTTCGAACCGTCGCCGGCGTCGACTGTTTCGTCTCACTACCTCGTCAGATACTCCACGTGCTTCAGTCCACGAGCTCATCTCTTCTCCCTCCGCTTCTCCCTGTCGAGCTCCGCTCCGGTGATCGTCGTTGGCCAGTTGCTTGGTCCGGCTCTAGCTCATCCTCTTCCGCGATCGAGGTTGCTAGAGTGTTTGCGGAAAGCATTTCGTTGCCGGATGGTACAGTGGTTCAGGTTCGAGTTCTCTCTAATATGCCGAAGGCTACTCTAGTAACAGTTGAACCAGAGACTGAAGATGATTGGGAAGTTCTCGAGCTCAATGCAGAGCTTGCCGAGGCTGCTATACTTAGTCAGGTGAGGATACTTCACGAGGCCATGAAGTTCCCTTTGTGGTTGCATGATCGAACTGTGATAAGATTTGCTGTGGTTTCAACATTTCCACCAAAAGGGGTGGTACAACTTGTGGCAGGAACTGAAGTGGCAGTGGCTCCTAAGAGACGTGAAAGGAATCTCAACGCGAAAAAGGGTCTTGATGCTTCGAGTAAAGATGTGAAAATCATGTTACGTGTACAAGATACCACTAGATCAGCGTTTCATGAAGCTGATGTCAAAGGATTTGATGTAAGGGTAGCCCTTACTTCTGTTGCCTATATTCATCCAGAAACTGCCGAGAAATACTCGCTAGAATCTCTTCAGATGATTTCTGTATCCCCAAGAATACCTTTGAAAGGTAGTGTGAAGAAAGACGAAGATTTAAATAAGAAAAACAGCGATGCTTCAAAGGTGGTTGAGAATGATAGTCACAGCTCGAAGAAAGAGCCCCGTCGAGCATTTGTTCGTCTTGTATTTTCGGATTTAGCTGCCAAAGGACATTTAATGATGGTGGAGTCTCTTCGTCTCTATCTAGGAGCAGGCCTTCACTCATGGGTTCACTTAAGGGGATGCAATGTCAACGTGCACAAAGAAGTTCCTGCTTTTTCACTTTCTCCGTGCATCTTTAAGATTTCTGAAAAGGAAAACGTGCTTGATAGAGGTACGGATATGCTTGGCAATCCAAATTCTAATAGAAGAAGCAGCCATCCACCTTCTGGATTGACCACCAATGTGGATGTTGTGGACTGGTCTGTGCACGAGAAGGTTGTTACGGCTCTTTTATCTGAGGGTTTACATATTGAAGGAGAACAGGACAATGCCTATCAACTTAAGAATAAGAAAGGACTGGAATGCCTTACTCGCCTGTGGTCATTGGCACAGCGTGATGCTATTGCGTCAGTCACAGGAATTGATGTTAGTTCGTTGATTTTAGGAAGGGAAACTTTGTTCCATTTTGAAGTGGGAGGCCTCGAATCTTATAAGTCAAGAGACGGGCAGCCTTCTGTTGTTGATCTTCTGGAAATTAGGAAGGACAAAATTGTTCCTTTAGAAATTTTGTACGTAATGACAGTCTCTGACGAGTCTTCGCTTCGTGATAAATTCGTTGCGTATGAGCTTACCTTGGATAGAAGTGAGAAGAAGGACAATGTGGTTCATATTGAGCCAATGCTTGAGAAAATGAATCTTGGCGAACCTATATTTTTCTCGTCTGCTAAAGAAAGACACTGCAATAAAGGTGTTTCCCCGGATGTATCTTCCTTAGCGTGGATGGGCTCAGCTGTGTCGGATGTTATCAAGAGGATGACCGTATTATTGTCTCCGACAGCTGGAATGTGGTTTAGCAAATTCAGTGTTCCTTCACCTGGACATATTCTCATATATGGGCCTCCTGGTTCAGGAAAGACAATATTAGCAAGAGCTGCTGCAAAGTACCTTGAGGAACAAAAAGACTTGTTGGCACATGTGATTCTGGTATCCTGTTCTGCACTTGCCATGGAGAAGGTTCAACACATCCGTCAAACCCTTTCTAGTGTAATAGCTGAAGGCTTGGAACATGCACCATCGGTCATCATTTTGGATGATCTTGATAGCATTATCTCATCATCTTCAGATAACGAAGGAACTCAAGCTTCGAATGCGATTACTATGCTTACAAAATTCCTAACAGATGTTATAGATGATTATGGGGAGTACAGGAATACCTCTTGTGGAATTGGCCCACTTGCATTTGTTGCTTCTGTCCAGTCTCTAGAACAAATTCCACAGACATTGAGTTCATCAGGAAGATTTGACTTTCATGTGCAACTGGCTGCTCCTGCTACTTCTGAACGTGGGGCGATACTGAAGCATGAAATACAAAAACGCCTTTTAGAGTGTTCGGAAGATATATTGCTCGAGTTAGCTGCAAAATGTGAAGGATATGATGCGTATGACCTGGAAATATTGGTTGATAGAGCTGTTCATGCTGCCATTGGCCGACATCTACCTTGTGAATCCAATGTATCCAAATATACTCTGGTCAAAGAAGACTTTACGCGAGCTATGCATGAATTTGTGCCTGTTGCCATGCGTGACATCACAAAATCTGCTTCGGAAGGTGGTCGCTCGGGGTGGGAAGATGTTGGAGGTGTGACTGATGTTAAAAATGCTATCAAAGAGATGATTGAGTTGCCATCCAGATTTCCGAAAATCTTTGCAAAGTCTCCTCTGCGTTTGAGATCAAATGTTCTCTTGTATGGCCCACCTGGTTGTGGGAAGACACACATAGTTGGTGCAGCTGCAGCAGCGTGTTCCCTACGGTTTATCTCAGTGAAGGGGCCTGAGCTCTTAAACAAATACATTGGTGCTTCTGAACAATCTGTCCGTGATATATTTGCAAAGGCAGCAGCCGCAGCACCATGCATACTCTTTTTCGATGAATTTGATTCAATTGCTCCCAAGAGAGGACATGACAACACCGGGGTTACTGATCGAGTTGTTAATCAATTCTTGACAGAGCTGGATGGAGTTGAAGTTCTAACCGGGGTCTTTGTATTTGCTGCTACAAGTAGGCCAGATCTGCTTGATCCTGCGCTACTGAGGCCTGGCCGGCTTGATCGTCTTCTTATGTGTGACTTTCCATCCCCACCAGAGCGATTAGAGATTCTCACAGTTCTCTCTAGAAAGCTTCCGATGGCTGATGATGTTGACCTAGATCCTATAGCTGCGATGACTGAAGGCTTTAGTGGAGCTGATCTTCAAGCTCTTCTCTCAGATGCGCAACTTGCAGCTGTTCACGAGTTTCTGAGCAAAGAAGATAGAACAGAGCCTGGAACGACTCCAATGATAACTGATCCTCTTCTGAAGTCGATCGCTTCCAAAACTAAACCATCGGTTTCTGAAGCCGAGAAGCAAAAGCTTTATGACATTTATAGTCAGTTTCTGGATTCAAGAAAATCGTCAAGAGAAGCAAAGGGCAAAAGAGCAACCTTAGCGTAA
Protein:  
METEAVVRTVAGVDCFVSLPRQILHVLQSTSSSLLPPLLPVELRSGDRRWPVAWSGSSSSSSAIEVARVFAESISLPDGTVVQVRVLSNMPKATLVTVEPETEDDWEVLELNAELAEAAILSQVRILHEAMKFPLWLHDRTVIRFAVVSTFPPKGVVQLVAGTEVAVAPKRRERNLNAKKGLDASSKDVKIMLRVQDTTRSAFHEADVKGFDVRVALTSVAYIHPETAEKYSLESLQMISVSPRIPLKGSVKKDEDLNKKNSDASKVVENDSHSSKKEPRRAFVRLVFSDLAAKGHLMMVESLRLYLGAGLHSWVHLRGCNVNVHKEVPAFSLSPCIFKISEKENVLDRGTDMLGNPNSNRRSSHPPSGLTTNVDVVDWSVHEKVVTALLSEGLHIEGEQDNAYQLKNKKGLECLTRLWSLAQRDAIASVTGIDVSSLILGRETLFHFEVGGLESYKSRDGQPSVVDLLEIRKDKIVPLEILYVMTVSDESSLRDKFVAYELTLDRSEKKDNVVHIEPMLEKMNLGEPIFFSSAKERHCNKGVSPDVSSLAWMGSAVSDVIKRMTVLLSPTAGMWFSKFSVPSPGHILIYGPPGSGKTILARAAAKYLEEQKDLLAHVILVSCSALAMEKVQHIRQTLSSVIAEGLEHAPSVIILDDLDSIISSSSDNEGTQASNAITMLTKFLTDVIDDYGEYRNTSCGIGPLAFVASVQSLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLECSEDILLELAAKCEGYDAYDLEILVDRAVHAAIGRHLPCESNVSKYTLVKEDFTRAMHEFVPVAMRDITKSASEGGRSGWEDVGGVTDVKNAIKEMIELPSRFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQSVRDIFAKAAAAAPCILFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLMCDFPSPPERLEILTVLSRKLPMADDVDLDPIAAMTEGFSGADLQALLSDAQLAAVHEFLSKEDRTEPGTTPMITDPLLKSIASKTKPSVSEAEKQKLYDIYSQFLDSRKSSREAKGKRATLA